Summary
This connects you to NCBI's Gene Expression Omnibus, the public repository with 264,000+ genomics studies and 8 million samples. You get programmatic access through GEOparse and E-utilities to search for microarray and RNA-seq datasets, pull down expression matrices, and grab supplementary files. The hierarchical structure (GSE series, GSM samples, GPL platforms) takes a minute to internalize, but once you do, it's straightforward to filter by organism or condition, extract gene-specific profiles, or build comparative analyses. Handles both the curated GDS collections and raw experimental data. If you're doing transcriptomics work and need existing datasets for validation or meta-analysis, this saves you from manual downloads.
Install to Claude Code
npx -y skills add davila7/claude-code-templates --skill geo-database --agent claude-codeInstalls into .claude/skills of the current project.
Keep your Mac awake while Claude Code and 40+ AI agents run. Sleeps when they're idle.
One time payment $9 →
Integrate web data into your AI product. One API to scrape website & brand data.
Get API Key Now →
Agent, run crypto. Access onchain data & trade routes via 1inch.
Install now →
On Capafy, your Skill runs online 24/7 as an agent product, and you get paid every time someone uses it.
Start earning →
Files
SKILL.md
Select a file.
Featured
Keep your Mac awake while Claude Code and 40+ AI agents run. Sleeps when they're idle.
One time payment $9 →Integrate web data into your AI product. One API to scrape website & brand data.
Get API Key Now →Agent, run crypto. Access onchain data & trade routes via 1inch.
Install now →On Capafy, your Skill runs online 24/7 as an agent product, and you get paid every time someone uses it.
Start earning →
